[phenixbb] phaser with certain spacegroups

Tom Terwilliger terwilliger at lanl.gov
Fri Sep 28 18:17:28 PDT 2007

Hi Joe,

Yes,  you can run phaser with a selected subset of the possible 
spacegroups in the GUI. Here is how:

1. Start the AutoMR wizard as usual, and on the 2nd screen...

A. say Yes to "Search all (selected) space groups with same point group"
B. Under 'Choose variable to set' , select "all_plausible_sg_list"

2. Then hit CONTINUE and you will get a list of space groups.  Edit 
out the ones you do not want with "Parameter group options" 
button.  You're done.  When you hit CONTINUE again the wizard will 
carry on with just the selected space groups.

3. If you want to make sure everything is ok, before you hit CONTINUE 
in step 2 after selecting the space groups you like, you can also 
select "Search Criteria" in NAVIGATE and then the 2nd screen will 
come up again with just the space groups you chose.

All the best,
Tom T

At 12:31 PM 9/28/2007, Joe Batchelor wrote:
>Can I run phaser through the phenix GUI using some, but not all, of 
>the possible spacegroups?
>phenixbb mailing list
>phenixbb at phenix-online.org

Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger at LANL.gov
Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web 
site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB

More information about the phenixbb mailing list