[phenixbb] phenixbb Digest, Vol 10, Issue 1

Paul Adams PDAdams at lbl.gov
Tue Sep 5 10:11:29 PDT 2006


Hi,

   can you take a look at the log file for the strategy (click the Log 
button at the bottom of the GUI)? Also, what files are written in the 
directory where you ran the strategy. I'm guessing that solve/resolve 
may have failed to run.

   Cheers,
	Paul

Pramod Kumar JRF wrote:

> Hi
> I am running structure solution strategy- solve MAD and 'top' is also
> doesnot shows that anything is running.
> and also 'Task' is also never appered on the taskbar alongwith wizards and
> strategies.
> 
> thanks in advance
> 
> Pramod Kumar,
> c/o Dr. Shekhar C. Mande
> Lab of structural biology
> Center for DNA Fingerprinting and Diagnostics
> ECIL Road, Nacharam,
> Hyderabad-500076
> India
> 
> 
> 
> On Fri, 1 Sep 2006 phenixbb-request at phenix-online.org wrote:
> 
> 
>>Send phenixbb mailing list submissions to
>>	phenixbb at phenix-online.org
>>
>>To subscribe or unsubscribe via the World Wide Web, visit
>>	http://www.phenix-online.org/mailman/listinfo/phenixbb
>>or, via email, send a message with subject or body 'help' to
>>	phenixbb-request at phenix-online.org
>>
>>You can reach the person managing the list at
>>	phenixbb-owner at phenix-online.org
>>
>>When replying, please edit your Subject line so it is more specific
>>than "Re: Contents of phenixbb digest..."
>>
>>
>>Today's Topics:
>>
>>   1. Strategies is not working on IRIX (Pramod Kumar JRF)
>>   2. Re: Strategies is not working on IRIX (Paul Adams)
>>
>>
>>----------------------------------------------------------------------
>>
>>Message: 1
>>Date: Fri, 1 Sep 2006 08:51:24 -0700
>>From: Pramod Kumar JRF <pramod at cdfd.org.in>
>>Subject: [phenixbb] Strategies is not working on IRIX
>>To: phenixbb at phenix-online.org
>>Message-ID:
>>	<Pine.SGI.4.44.0609010841320.231393-100000 at www.cdfd.org.in>
>>Content-Type: TEXT/PLAIN; charset=US-ASCII
>>
>>Hi
>>I have installed the IRIX version of the phexinx1.24b.I am able to run
>>the wizards on my sgi but not strategies. Even after several hours its not
>>turning green,which is an indication that its not running.what could be
>>the problem?
>>
>>thanks in advance
>>
>>With regards
>>Pramod Kumar,
>>c/o Dr. Shekhar C. Mande
>>Lab of structural biology
>>Center for DNA Fingerprinting and Diagnostics
>>ECIL Road, Nacharam,
>>Hyderabad-500076
>>India
>>
>>
>>
>>
>>
>>
>>------------------------------
>>
>>Message: 2
>>Date: Fri, 01 Sep 2006 08:58:41 -0700
>>From: Paul Adams <PDAdams at lbl.gov>
>>Subject: Re: [phenixbb] Strategies is not working on IRIX
>>To: PHENIX user mailing list <phenixbb at phenix-online.org>
>>Message-ID: <44F858B1.3000507 at lbl.gov>
>>Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>>
>>Hi,
>>
>>   which strategy are you trying to run. Does 'top' show anything running?
>>
>>   Cheers,
>>	Paul
>>
>>Pramod Kumar JRF wrote:
>>
>>>Hi
>>>I have installed the IRIX version of the phexinx1.24b.I am able to run
>>>the wizards on my sgi but not strategies. Even after several hours its not
>>>turning green,which is an indication that its not running.what could be
>>>the problem?
>>>
>>>thanks in advance
>>>
>>>With regards
>>>Pramod Kumar,
>>>c/o Dr. Shekhar C. Mande
>>>Lab of structural biology
>>>Center for DNA Fingerprinting and Diagnostics
>>>ECIL Road, Nacharam,
>>>Hyderabad-500076
>>>India
>>>
>>>
>>>
>>>
>>>_______________________________________________
>>>phenixbb mailing list
>>>phenixbb at phenix-online.org
>>>http://www.phenix-online.org/mailman/listinfo/phenixbb
>>
>>--
>>Paul Adams
>>Senior Staff Scientist, Physical Biosciences Division
>>Head, Berkeley Center for Structural Biology
>>Deputy Principal Investigator, Berkeley Structural Genomics Center
>>
>>Building 64, Room 248
>>Tel: 510-486-4225, Fax: 510-486-5909
>>http://cci.lbl.gov/
>>
>>Lawrence Berkeley Laboratory
>>1 Cyclotron Road
>>BLDG 64R0121
>>Berkeley, CA 94720, USA.
>>--
>>
>>
>>------------------------------
>>
>>_______________________________________________
>>phenixbb mailing list
>>phenixbb at phenix-online.org
>>http://www.phenix-online.org/mailman/listinfo/phenixbb
>>
>>
>>End of phenixbb Digest, Vol 10, Issue 1
>>***************************************
>>
> 
> 
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://www.phenix-online.org/mailman/listinfo/phenixbb

-- 
Paul Adams
Senior Staff Scientist, Physical Biosciences Division
Head, Berkeley Center for Structural Biology
Deputy Principal Investigator, Berkeley Structural Genomics Center

Building 64, Room 248
Tel: 510-486-4225, Fax: 510-486-5909
http://cci.lbl.gov/

Lawrence Berkeley Laboratory
1 Cyclotron Road
BLDG 64R0121
Berkeley, CA 94720, USA.
--




More information about the phenixbb mailing list