[phenixbb] s_annealing within AutoBUILD
terwilliger at lanl.gov
Fri Jul 14 13:20:55 PDT 2006
Yes, you can modify the parameter "s_annealing" by going to the menu at the
bottom right corner of the Parameters (inputs) screen labelled
SET VARIABLE (Advanced users)
and selecting "s_annealing"
then click "CONTINUE" and a screen will come up allowing you to choose Yes
or No to s_annealing. Then when you click CONTIUE the wizard will continue
whatever it was doing.
You can set this variable when you are setting up your run; do it any time
before the last screen comes up.
All the best,
At 03:54 PM 7/14/2006 -0400, Noinaj wrote:
>I am running AUTOBUILD on a friend's structure, and noticed in the log
>file the s_annealing parameter set to false. Is it possible to set this
>parameter to true when doing an AUTOBUILD run, say to do s_a after each
>build cycle? I have read that I can use phenix.refine at the command line
>to run s_annealing, but didn't know if I could modify this option within
>the wizards. I checked out the list of parameters which I am allowed to
>change, but didn't see s_anneal anywhere.
>Thanks for all replies in advance!
>University of Kentucky School of Medicine
>Department of Molecular and Cellular Biochemistry
>Biomedical Biological Sciences Research Building, Rm 236
>741 S. Limestone
>Lexington, Ky 40536
><mailto:noinaj at uky.edu>noinaj at uky.edu
>phenixbb mailing list
>phenixbb at phenix-online.org
Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545
Tel: 505-667-0072 email: terwilliger at LANL.gov
Fax: 505-665-3024 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site:
TB Structural Genomics Consortium web site: http://www.tbgenomics.org
More information about the phenixbb